No java installations was detected, although I have Java

$ java -version
java version "1.6.0_65"
Java(TM) SE Runtime Environment (build 1.6.0_65-b14-462-11M4609)
Java HotSpot(TM) 64-Bit Server VM (build 20.65-b04-462, mixed mode)

$ which java
/usr/bin/java

$ ls /usr/libexec/java_home
/usr/libexec/java_home

But when I run some application from the terminal, is says in terminal:

No java installations was detected.
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